aliases digest description fasta asset # assets
hg38_primary 047c6e1eda552b50c5add59ff0995a40bc4ce1732e3cc4ae UCSC hg38 assembly with primary chromosomes only fasta:default 3
mm10 0f10d83b1050c08dd53189986f60970b92a315aa7a16a6f1 The GCA_000001635.5 seqs_for_alignment_pipelines from NCBI fasta:default 16
hg38 2230c535660fb4774114bfa966a62f823fdb6d21acf138d4 The GCA_000001405.15 GRCh38_no_alt_analysis_set from NCBI fasta:default 18
human_alphasat 3cd9f8c34e28a1e8823632449b6d8a6afe5a1032245e7475 Manually curated human alpha-satellite sequences from GenBank, obtained from ref_decoy fasta:default 7
mouse_chrM2x 43f14ba8beed34d52edb244e26f193df6edbb467bd55d37a The mouse mitochondrial genome, doubled fasta:default 7
hs38d1 45818b389d17308bb520512bb0d4f76764430c3eaaacc4a9 Decoy version 1 for GRCh38 from NCBI fasta:default 7
hg18_cdna 4bd8aa05a153e0c96a79c53915bc8d1f4a21fb0b75f93b87 The NCBI36 cDNA reference sequence from Ensembl fasta:default 2
hg38_mm10 644d2b9de4adaccb31c8bde387f23edddc5834772dd51d33 Merged genome with primary chromosomes of hg38 and mm10 from UCSC. fasta:default 2
t7 6c5f19c9c2850e62cc3f89b04047fa05eee911662bd77905 Genome of T7 phage, V01146.1 from GenBank fasta:default 2
human_repeats 7319f9237651755047bc40d7f7a9770d42a537e840f4e105 Manually curated collection of human repeat sequences from GenBank fasta:default 7
human_alu 74a50bdcb018c11d17d94d44679da3cbb3cb420df0ab1e46 Manually curated human ALU repeats from GenBank, obtained from ref_decoy fasta:default 6
rn6 79168fd950d561cf5ce454dd27593c0af429b32cddce5ce9 The GCA_000001895.4_Rnor_6.0_genomic from NCBI fasta:default 13
dm6 8baf9d24ad8f5678f0fe1f5b21a812d410755d49e3123158 Drosophila reference genome GCF_000001215.4 from NCBI fasta:default 5
rCRSd 94e0d21feb576e6af61cd2a798ad30682ef2428bb7eabbb4 The revised cambridge reference sequence. This is the human mitochondrial reference genome fasta:default 6
hg38_cdna 9a02d64909100f146272f8e16563178e9e93c218b1126ff9 The GRCh38 cDNA reference sequence from Ensembl fasta:default 3
hg18 9b7fd88cae1bd01bf53760fb426e2aeb299150cc64af2b01 The NCBI36 reference sequence from UCSC. The individual chromosome files were concatenated prior to the asset building fasta:default 10
hg38_noalt_decoy a735e331b2a8ae5cd4e7519575c4c09426a276175c57bd79 The GRCh38 reference with decoy and without alternative haplotypes from NCBI fasta:default 7
human_rDNA b769bcf2deaf9d061d94f2007a0e956249905c64653cb5c8 Human rDNA sequences curated from GenBank fasta:default 7
hg19 baa91c8f6e2780cfd8fd1040ff37f51c379947a2a4820d6c The GRCh37 reference sequence from UCSC fasta:default 17
mm10_primary bfdbdd006617e34e64b298f48785022d9376acad57260aaf UCSC mm10 assembly with primary chromosomes only fasta:default 3
rn6_cdna d982f0b1888504cccc131d5fa2c11eb3522b9a8e95e0ea89 The Rnor_6.0 cDNA reference sequence from Ensembl fasta:default 3
mm10_cdna fa159612d40b1bedea9a279eb24999b3d27145f9dd70dcca The GRCm38 cDNA reference sequence from Ensembl fasta:default 3
hg19_cdna fc77e33fa26398662380748a62ab6279dab2a637256acd89 The GRCh37 cDNA reference sequence from Ensembl fasta:default 3
hg38_chr22 fec6bcce9821b57f98ffc5d46ebec4f2f756c2e9db800ab7 Includes only chromosome 22 from the hg38 reference. Useful for testing. fasta:default 7