Aliases: human_alphasat

Digest: 3cd9f8c34e28a1e8823632449b6d8a6afe5a1032245e7475

Description: Manually curated human alpha-satellite sequences from GenBank, obtained from ref_decoy

Assets table

download asset name:tag asset description asset/archive size archive digest
bismark_bt2_index:default Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 16.5MB / 350.6KB cb9c068a92e1d7826fd468312a9bb181
bowtie2_index:default Genome index for bowtie, produced with bowtie-build 8.1MB / 232.6KB e5810e903815eefe5f604af425bb3274
bwa_index:default Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index 174.4KB / 81.5KB 917462f14021466f97901e9d99b5edaf
fasta:default DNA sequences in the FASTA format, indexed FASTA (produced with samtools index) and chromosome sizes file 108.4KB / 21.1KB 30951d472f34a8239c9b57289853fa83
hisat2_index:default Genome index for HISAT2, produced with hisat2-build 4.5MB / 217.9KB 6be094f2ef420d53ec16b753edec4e2e
star_index:default Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate 1.5GB / 10.8MB 7432ca7c1cb3d1f03ccdf9a5d2e46f34
suffixerator_index:default Enhanced suffix array index for genomes using gt (GenomeTools) suffixerator program 896.4KB / 371.2KB bdad5e67916931f4664bef7e29849c67