Aliases: human_repeats

Digest: 7319f9237651755047bc40d7f7a9770d42a537e840f4e105

Description: Manually curated collection of human repeat sequences from GenBank

Assets table

download asset name:tag asset description asset/archive size archive digest
bismark_bt2_index:default Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 16.7MB / 554.7KB d5771b28f8e013f09f9deca70963b45b
bowtie2_index:default Genome index for bowtie, produced with bowtie-build 8.2MB / 415.2KB a09efca2b9b3790262b90cc2b100bef2
bwa_index:default Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index 252.7KB / 130.8KB 0f408be2540adf21fab352c369306048
fasta:default DNA sequences in the FASTA format, indexed FASTA (produced with samtools index) and chromosome sizes file 159.6KB / 33.8KB 54944f3c114d81c83591296c8ea084ea
hisat2_index:default Genome index for HISAT2, produced with hisat2-build 4.6MB / 348.6KB c66354164119af89e4813b8e6f0587e9
star_index:default Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate 1.5GB / 17.1MB f7dbcddbce5e095fa86cc768c2cf5c15
suffixerator_index:default Enhanced suffix array index for genomes using gt (GenomeTools) suffixerator program 1.3MB / 539.4KB 6318fd24a59884861cebf8b1df781cc7