Aliases: hg38_noalt_decoy

Digest: a735e331b2a8ae5cd4e7519575c4c09426a276175c57bd79

Description: The GRCh38 reference with decoy and without alternative haplotypes from NCBI

Assets table

download asset name:tag asset description asset/archive size archive digest
bismark_bt2_index:default Genome index for Bisulfite-Seq applications, produced by bismark_genome_preparation using bowtie2 13.6GB / 7.5GB 7885fb9f40d486dee9788b4ce0115da6
bowtie2_index:default Genome index for bowtie, produced with bowtie-build 3.9GB / 3.5GB dd593d6b92f996a9f150275344a6b5a5
bwa_index:default Genome index for Burrows-Wheeler Alignment Tool, produced with bwa index 5.1GB / 3.2GB 4573492db4e3b701e32c377a112cc699
fasta:default DNA sequences in the FASTA format, indexed FASTA (produced with samtools index) and chromosome sizes file 2.9GB / 835.0MB 1d7351aa91571b724245f334bc79908a
hisat2_index:default Genome index for HISAT2, produced with hisat2-build 4.2GB / 3.9GB 8d5e7f869c9a1758f5808245c9bb2663
star_index:default Genome index for STAR RNA-seq aligner, produced with STAR --runMode genomeGenerate 27.6GB / 48.6GB 4897bcfb6e5f4f5b688c20ca2eee8618
suffixerator_index:default Enhanced suffix array index for genomes using gt (GenomeTools) suffixerator program 27.4GB / 15.9GB f8d42df4375a411feb6194c681ef9cfb