rn6/salmon_partial_sa_index:default
Description: Transcriptome index for salmon, produced with salmon index using partial selective alignment method. Preparation includes transcriptome mapping to the genome and extraction of the relevant portion out from the genome and indexing it along with the transcriptome. Recipe source -- https://github.com/COMBINE-lab/SalmonTools/blob/master/scripts/generateDecoyTranscriptome.sh
Attributes
- asset_path:
salmon_partial_sa_index
- seek_keys:
- archive_digest:
2150140e46850a07ee82479dcb767080
- archive_size:
408.3MB
- asset_size:
797.1MB
- asset_parents:
- asset_children:
- asset_digest:
b7a1aa4d19028b3525adafb4295826f0
- legacy_archive_digest:
f20e45bdb58dc5f1222df6f68fb8352d
Asset directory contents
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http |
s3:
79168fd950d561cf5ce454dd27593c0af429b32cddce5ce9.gtf
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http |
s3:
complete_ref_lens.bin
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s3:
ctable.bin
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s3:
ctg_offsets.bin
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http |
s3:
decoys.txt
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s3:
duplicate_clusters.tsv
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http |
s3:
gentrome.fa
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s3:
info.json
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s3:
mphf.bin
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s3:
pos.bin
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http |
s3:
pre_indexing.log
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s3:
rank.bin
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s3:
ref_indexing.log
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http |
s3:
refAccumLengths.bin
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http |
s3:
reflengths.bin
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http |
s3:
refseq.bin
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s3:
seq.bin
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s3:
versionInfo.json