hg38/cellranger_reference:default

Description: Cell Ranger custom genome reference for read alignment and gene expression quantification

Attributes

  • asset_path: cellranger_reference
  • asset_digest: f30c323d6d86ebea3bc66d7bda78eee3
  • seek_keys:
  • asset_parents:
  • archive_digest: 5b263624451abfa416b8661703df65f6
  • archive_size: 10.7GB
  • asset_size: 17.7GB
  • asset_children: None
  • legacy_archive_digest: 7a5a03758c653c107f293ca900046d1e

API endpoints

Asset directory contents

  • http | s3: 2230c535660fb4774114bfa966a62f823fdb6d21acf138d4_filtered.gtf
  • http | s3: Log.out
  • http | s3: ref/fasta/genome.fa
  • http | s3: ref/fasta/genome.fa.fai
  • http | s3: ref/genes/genes.gtf
  • http | s3: ref/pickle/genes.pickle
  • http | s3: ref/reference.json
  • http | s3: ref/star/chrLength.txt
  • http | s3: ref/star/chrName.txt
  • http | s3: ref/star/chrNameLength.txt
  • http | s3: ref/star/chrStart.txt
  • http | s3: ref/star/exonGeTrInfo.tab
  • http | s3: ref/star/exonInfo.tab
  • http | s3: ref/star/geneInfo.tab
  • http | s3: ref/star/Genome
  • http | s3: ref/star/genomeParameters.txt
  • http | s3: ref/star/SA
  • http | s3: ref/star/SAindex
  • http | s3: ref/star/sjdbInfo.txt
  • http | s3: ref/star/sjdbList.fromGTF.out.tab
  • http | s3: ref/star/sjdbList.out.tab
  • http | s3: ref/star/transcriptInfo.tab