hg19/salmon_partial_sa_index:default
Description: Transcriptome index for salmon, produced with salmon index using partial selective alignment method. Preparation includes transcriptome mapping to the genome and extraction of the relevant portion out from the genome and indexing it along with the transcriptome. Recipe source -- https://github.com/COMBINE-lab/SalmonTools/blob/master/scripts/generateDecoyTranscriptome.sh
Attributes
- asset_path:
salmon_partial_sa_index
- seek_keys:
- archive_digest:
c256c89cfba22973f1e9b96cc59328aa
- archive_size:
879.5MB
- asset_size:
2.4GB
- asset_parents:
- asset_children:
- asset_digest:
1c9e9bfa5bc243254cafd0e665c6aceb
- legacy_archive_digest:
211c5928295305b487f920c1b909b706
Asset directory contents
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http |
s3:
baa91c8f6e2780cfd8fd1040ff37f51c379947a2a4820d6c.gtf
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s3:
complete_ref_lens.bin
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s3:
ctable.bin
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s3:
ctg_offsets.bin
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s3:
decoys.txt
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s3:
duplicate_clusters.tsv
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s3:
gentrome.fa
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s3:
info.json
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s3:
mphf.bin
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s3:
pos.bin
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s3:
pre_indexing.log
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s3:
rank.bin
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s3:
ref_indexing.log
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s3:
refAccumLengths.bin
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s3:
reflengths.bin
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s3:
refseq.bin
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s3:
seq.bin
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s3:
versionInfo.json